Install¶
We recommending downloading the static binary.
Download the strling binary from the latest release here.
Make it executable: chmod +x strling
Install with conda¶
We suggest conda installation if you want to perform outlier analysis, which requires a python script.
conda config --add channels bioconda
conda install -y strling
The following should now be in your path: strling strling-outliers.py
Note: It should be safe to ignore “Solving environment: failed …” messages as long as the message “Solving environment: done” appears following the failed message and the install proceeds.
Install from source¶
Install nim: curl https://nim-lang.org/choosenim/init.sh -sSf > init.sh && sh init.sh
Install STRling:
git clone <URL>
cd STRling
nimble install
Compile options for development:
Compile in fast mode (danger): nim c -d:danger -d:release src/strling.nim