Install

We recommending downloading the static binary.

Download the strling binary from the latest release here.

Make it executable: chmod +x strling

Install with conda

We suggest conda installation if you want to perform outlier analysis, which requires a python script.

conda config --add channels bioconda
conda install -y strling

The following should now be in your path: strling strling-outliers.py

Note: It should be safe to ignore “Solving environment: failed …” messages as long as the message “Solving environment: done” appears following the failed message and the install proceeds.

Install from source

Install nim: curl https://nim-lang.org/choosenim/init.sh -sSf > init.sh && sh init.sh

Install STRling:

git clone <URL>
cd STRling
nimble install

Compile options for development:

Compile in fast mode (danger): nim c -d:danger -d:release src/strling.nim